Table 1.

Model structure categories. References in bold represent metapopulation models. References with author names in italics represent references that use empirical data for parametrization and/or validation. PrEP, pre-exposure prohylaxis. References in category ‘Other’ specify a disease other than the above. Hygiene measures include face-mask use, increased hand washing, etc. For more information, see online appendix.

population levelnetwork/IBM
diseaseprevention measureinfectious disease statemodel parametersinfectious disease statemodel parameterscontact structure
influenza/ILIvaccinationBhattacharyya & Bauch [19], Liu et al. [20], Breban [21], Laguzet & Turinici [22], Shim et al. [23], Cohen et al. [24], Xia & Liu [25]Vardavas et al. [26]Liu et al. [20], Cardillo et al. [27], Wu & Zhang [28], Zhang [29], Han & Sun [30], Fukuda et al. [31], Cornforth et al. [32], Fu et al. [33], Loganathan et al. [34], Wells & Bauch [35], Zhang et al. [36], Wells et al. [37], Xia & Liu [38], Fukuda et al. [39], Liao & You [40], Andrews & Bauch [41]Marathe et al. [42], Mei et al. [43], Zhang et al. [44], Karimi et al. [45]
Social DistancingPoletti et al. [46], Mummert & Weiss [47], Zhong et al. [48]Larson & Nigmatulina [49], Wang [50], Greer [51], Morin et al. [52], Liu et al. [53], Poletti et al. [54], He et al. [55], Springborn et al. [56]Mei et al. [43], Karimi et al. [45], Barrett et al. [57,58], Wang et al. [59], Bayham et al. [60]Chen et al. [61]
PrEP antiviralsLiao & You [40]Liao & You [40], Marathe et al. [42], Mei et al. [43], Barrett et al. [58], Chen et al. [61], Mao & Bian [62], Mao & Yang [63], Andrews & Bauch [41]
hygiene measuresLarson & Nigmatulina [49], Parikh et al. [64], Poletti et al. [54]Mei et al. [43], Wang et al. [59], Parikh et al. [64]
other and generalXiao et al. [65], Pawelek et al. [66]Liao et al. [67], Collinson et al. [68]Zhang et al. [69], Fierro & Liccardo [70]
HIVcondom useNyabadza et al. [71], Johnson et al. [72]Vieira et al. [73]
reduce sexual riskAlimadad et al. [74]Tully et al. [75,76]
social distancingNyabadza et al. [71,77], Reniers & Armbruster [78], Reluga & Li [79], Viljoen et al. [80]Tully et al. [75]
other and generalKassa & Ouhinou [81,82]Marshall et al. [83]
syphilis and gonorrhoeacondom useMorin et al. [84]Gray et al. [85]
vaccinationMilner & Zhao [86]
reduce sexual riskMilner & Zhao [86]
social distancingAadland et al. [87]Gray et al. [85]Althouse & Hébert-Dufresne [88]
measles and pertussisvaccinationBhattacharyya & Bauch [89], Shim et al. [90], Bauch & Bhattacharyya [91], d'Onofrio et al. [92], Oraby et al. [93]
othersocial distancingPerra et al. [94], Sharma & Misra [95], Greenhalgh et al. [96]Cooper et al. [97], Del Valle et al. [98], Wang et al. [99]Fast et al. [100]Robinson et al. [14]
vaccinationSharma & Misra [95], Sykes & Rychtar [101]
other and generalMisra et al. [102]Cooper et al. [97]Williams et al. [103]
general modelssocial distancingFunk et al. [104], Misra et al. [105], Samanta et al. [106], Zuo & Liu [107], Misra et al. [108], Wang et al. [109]Reluga [110], Brauer [111], Fenichel et al. [112], Buonomo et al. [113], Xiao et al. [114], Liu [115], Wang et al. [116], Li et al. [117], Morin et al. [118], Li et al. [119], Liu et al. [120], Lubuma & Terefe [121]Sahneh & Scoglio [122]Wu et al. [123], Wang et al. [124], Cao [125], Zhang et al. [126], Schumm et al. [127], Meloni et al. [128], Sun et al. [129], Bichara et al. [130], Liu & Zheng [131]Van Segbroeck et al. [12], Shaw & Schwartz [132], Jolad et al. [133], Maharaj & Kleczkowski [134], Rogers et al. [135], Valdez et al. [136], Zhang et al. [137], Juher et al. [138], Liu et al. [139], Noble et al. [140], Valdez et al. [141], Tunc & Shaw [142], Dong et al. [143], Szabo-Solticzky et al. [144], Nicolaides et al. [145], Maharaj et al. [146]
vaccinationBauch et al. [147], d'Onofrio & Manfredi [148], Buonomo et al. [149], d'Onofrio et al. [150], Reluga & Galvani [151], Wu et al. [152], Buonomo et al. [153], Xu & Cressman [154], Bhattacharyya et al. [155], Oraby & Bauch [156], Voinson et al. [157]Barbagallo & Cojocaru [10]Mbah et al. [13], Dong et al. [143], Schimit & Monteiro [158], Wells et al. [159], Morsky & Bauch [160], Ruan et al. [161], Campbell & Salathe [162], Wu et al. [163], Cai et al. [164], Wu et al. [165], Han et al. [166], Helbing et al. [167], Liang & Juang [168]Zhang et al. [169]
hygiene measuresFunk et al. [104]
other and generalJoshi et al. [170]Reluga [11], Liu & Stechlinski [171], Samanta & Chattopadhyay [172], Sega et al. [173]Hatzopoulos et al. [174], Sahneh & Scoglio [175], Sahneh et al. [176], Miller [177], Yuan et al. [178], Goyal & Vigier [179], Guo et al. [180], Juher et al. [181], Liu et al. [182], Chen et al. [183]Goyal & Vigier [179], Kitchovitch and Lio [184,185], Ni et al. [186], Rutherford et al. [187], Shang [188,189]